Dataset Viewer
Duplicate
The dataset viewer is not available for this split.
Cannot extract the features (columns) for the split 'train' of the config 'default' of the dataset.
Error code:   FeaturesError
Exception:    ArrowInvalid
Message:      JSON parse error: Column(/prov_jsonld/@context/[]) changed from object to string in row 0
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 174, in _generate_tables
                  df = pandas_read_json(f)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 38, in pandas_read_json
                  return pd.read_json(path_or_buf, **kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 815, in read_json
                  return json_reader.read()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1025, in read
                  obj = self._get_object_parser(self.data)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1051, in _get_object_parser
                  obj = FrameParser(json, **kwargs).parse()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1187, in parse
                  self._parse()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1403, in _parse
                  ujson_loads(json, precise_float=self.precise_float), dtype=None
              ValueError: Trailing data
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/split/first_rows.py", line 228, in compute_first_rows_from_streaming_response
                  iterable_dataset = iterable_dataset._resolve_features()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 3422, in _resolve_features
                  features = _infer_features_from_batch(self.with_format(None)._head())
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2187, in _head
                  return next(iter(self.iter(batch_size=n)))
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2391, in iter
                  for key, example in iterator:
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1882, in __iter__
                  for key, pa_table in self._iter_arrow():
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1904, in _iter_arrow
                  yield from self.ex_iterable._iter_arrow()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 499, in _iter_arrow
                  for key, pa_table in iterator:
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 346, in _iter_arrow
                  for key, pa_table in self.generate_tables_fn(**gen_kwags):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 177, in _generate_tables
                  raise e
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 151, in _generate_tables
                  pa_table = paj.read_json(
                File "pyarrow/_json.pyx", line 308, in pyarrow._json.read_json
                File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
                File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
              pyarrow.lib.ArrowInvalid: JSON parse error: Column(/prov_jsonld/@context/[]) changed from object to string in row 0

Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.

MatPROV

MatPROV is a dataset of materials synthesis procedures extracted from scientific papers using large language models (LLMs) and represented in PROV-DM–compliant structures. Further details on MatPROV are described in our paper "MatPROV: A Provenance Graph Dataset of Material Synthesis Extracted from Scientific Literature.”


Files

MatPROV/
├── MatPROV.jsonl  # Main dataset (2,367 synthesis procedures)
├── ground-truth/  # Expert-annotated ground truth
│ └─ <DOI>.json
├── few-shot/.     # Prompt examples used for synthesis procedure extraction
│ └─ <DOI>.txt
└── doi_status.csv # Status of each paper DOI across the pipeline

Note: In file names under ground-truth/ and few-shot/, forward slashes (/) in DOIs are replaced with underscores (_).


Data format

The main dataset file is MatPROV.jsonl, where each line corresponds to one paper’s structured record. Each record contains:

  • doi: DOI of the source paper
  • label: Identifier for the extracted synthesis procedure, encoding the material's chemical composition and key synthesis characteristics (e.g., CuGaTe2_ball-milling)
  • prov_jsonld: A PROV-JSONLD structure describing the synthesis procedure

Example

{
  "doi": "10.1002/advs.201600035",
  "label": "Fe1+xNb0.75Ti0.25Sb_composition variation",
  "prov_jsonld": {
    "@context": [
      {"xsd": "http://www.w3.org/2001/XMLSchema#", "prov": "http://www.w3.org/ns/prov#"},
      "https://openprovenance.org/prov-jsonld/context.jsonld",
      "URL of MatPROV's context schema omitted for double-blind review"
    ],
    "@graph": [
      {
        "@type": "Entity",
        "@id": "e1",
        "label": [{"@value": "Fe", "@language": "EN"}],
        "type": [{"@value": "material"}],
        "matprov:purity": [{"@value": "99.97%", "@type": "xsd:string"}]
      }
      ...
    ]
  }
}

Visualization

You can visualize the PROV-JSONLD data in MatPROV using the online tool at: https://matprov-project.github.io/prov-jsonld-viz/ To do this, copy the value of the "prov_jsonld" field from any record in MatPROV.jsonl and paste it into the “PROV-JSONLD Editor” panel of the tool. A directed graph of the synthesis procedure will then be generated, as shown in the figure below.

Graph visualization

Dataset construction summary

  • Source papers collected: 1648
  • Relevant Text Extraction
    • 32 papers contained no synthesis-related text
    • → 1616 papers remained
  • Synthesis Procedure Extraction
    • 48 papers contained no synthesis procedure
    • → 1568 papers remained (final dataset)

The DOIs of these 1568 papers and their extracted data are included in MatPROV.jsonl. For details on the filtering status of each DOI, see doi_status.csv.

Ground Truth annotations

  • A subset of papers was manually annotated by a single domain expert.
  • Files are stored in ground-truth/ and named as <DOI>.json.

Few-shot examples

  • Prompt examples used for LLM extraction are provided in few-shot/.
  • Files are stored in few-shot/ and named as <DOI>.txt.

Links

Citation

If you use MatPROV, please cite:

@inproceedings{tsuruta2025matprov,
  title={Mat{PROV}: A Provenance Graph Dataset of Material Synthesis Extracted from Scientific Literature},
  author={Hirofumi Tsuruta and Masaya Kumagai},
  booktitle={NeurIPS 2025 Workshop on AI for Accelerated Materials Design},
  year={2025}
}
Downloads last month
73

Paper for MatPROV-project/MatPROV

MatPROV-project/MatPROV · Datasets at Hugging Face
Dataset Viewer
Duplicate
The dataset viewer is not available for this split.
Cannot extract the features (columns) for the split 'train' of the config 'default' of the dataset.
Error code:   FeaturesError
Exception:    ArrowInvalid
Message:      JSON parse error: Column(/prov_jsonld/@context/[]) changed from object to string in row 0
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 174, in _generate_tables
                  df = pandas_read_json(f)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 38, in pandas_read_json
                  return pd.read_json(path_or_buf, **kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 815, in read_json
                  return json_reader.read()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1025, in read
                  obj = self._get_object_parser(self.data)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1051, in _get_object_parser
                  obj = FrameParser(json, **kwargs).parse()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1187, in parse
                  self._parse()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 1403, in _parse
                  ujson_loads(json, precise_float=self.precise_float), dtype=None
              ValueError: Trailing data
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/split/first_rows.py", line 228, in compute_first_rows_from_streaming_response
                  iterable_dataset = iterable_dataset._resolve_features()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 3422, in _resolve_features
                  features = _infer_features_from_batch(self.with_format(None)._head())
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2187, in _head
                  return next(iter(self.iter(batch_size=n)))
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2391, in iter
                  for key, example in iterator:
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1882, in __iter__
                  for key, pa_table in self._iter_arrow():
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1904, in _iter_arrow
                  yield from self.ex_iterable._iter_arrow()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 499, in _iter_arrow
                  for key, pa_table in iterator:
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 346, in _iter_arrow
                  for key, pa_table in self.generate_tables_fn(**gen_kwags):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 177, in _generate_tables
                  raise e
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 151, in _generate_tables
                  pa_table = paj.read_json(
                File "pyarrow/_json.pyx", line 308, in pyarrow._json.read_json
                File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
                File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
              pyarrow.lib.ArrowInvalid: JSON parse error: Column(/prov_jsonld/@context/[]) changed from object to string in row 0

Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.

MatPROV

MatPROV is a dataset of materials synthesis procedures extracted from scientific papers using large language models (LLMs) and represented in PROV-DM–compliant structures. Further details on MatPROV are described in our paper "MatPROV: A Provenance Graph Dataset of Material Synthesis Extracted from Scientific Literature.”


Files

MatPROV/
├── MatPROV.jsonl  # Main dataset (2,367 synthesis procedures)
├── ground-truth/  # Expert-annotated ground truth
│ └─ <DOI>.json
├── few-shot/.     # Prompt examples used for synthesis procedure extraction
│ └─ <DOI>.txt
└── doi_status.csv # Status of each paper DOI across the pipeline

Note: In file names under ground-truth/ and few-shot/, forward slashes (/) in DOIs are replaced with underscores (_).


Data format

The main dataset file is MatPROV.jsonl, where each line corresponds to one paper’s structured record. Each record contains:

  • doi: DOI of the source paper
  • label: Identifier for the extracted synthesis procedure, encoding the material's chemical composition and key synthesis characteristics (e.g., CuGaTe2_ball-milling)
  • prov_jsonld: A PROV-JSONLD structure describing the synthesis procedure

Example

{
  "doi": "10.1002/advs.201600035",
  "label": "Fe1+xNb0.75Ti0.25Sb_composition variation",
  "prov_jsonld": {
    "@context": [
      {"xsd": "http://www.w3.org/2001/XMLSchema#", "prov": "http://www.w3.org/ns/prov#"},
      "https://openprovenance.org/prov-jsonld/context.jsonld",
      "URL of MatPROV's context schema omitted for double-blind review"
    ],
    "@graph": [
      {
        "@type": "Entity",
        "@id": "e1",
        "label": [{"@value": "Fe", "@language": "EN"}],
        "type": [{"@value": "material"}],
        "matprov:purity": [{"@value": "99.97%", "@type": "xsd:string"}]
      }
      ...
    ]
  }
}

Visualization

You can visualize the PROV-JSONLD data in MatPROV using the online tool at: https://matprov-project.github.io/prov-jsonld-viz/ To do this, copy the value of the "prov_jsonld" field from any record in MatPROV.jsonl and paste it into the “PROV-JSONLD Editor” panel of the tool. A directed graph of the synthesis procedure will then be generated, as shown in the figure below.

Graph visualization

Dataset construction summary

  • Source papers collected: 1648
  • Relevant Text Extraction
    • 32 papers contained no synthesis-related text
    • → 1616 papers remained
  • Synthesis Procedure Extraction
    • 48 papers contained no synthesis procedure
    • → 1568 papers remained (final dataset)

The DOIs of these 1568 papers and their extracted data are included in MatPROV.jsonl. For details on the filtering status of each DOI, see doi_status.csv.

Ground Truth annotations

  • A subset of papers was manually annotated by a single domain expert.
  • Files are stored in ground-truth/ and named as <DOI>.json.

Few-shot examples

  • Prompt examples used for LLM extraction are provided in few-shot/.
  • Files are stored in few-shot/ and named as <DOI>.txt.

Links

Citation

If you use MatPROV, please cite:

@inproceedings{tsuruta2025matprov,
  title={Mat{PROV}: A Provenance Graph Dataset of Material Synthesis Extracted from Scientific Literature},
  author={Hirofumi Tsuruta and Masaya Kumagai},
  booktitle={NeurIPS 2025 Workshop on AI for Accelerated Materials Design},
  year={2025}
}
Downloads last month
73

Paper for MatPROV-project/MatPROV